BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B04LP1|AL425473
(1011 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1632 1800 0.0
>3x_Contig1632
Length = 13927
Score = 1800 bits (899), Expect = 0.0
Identities = 947/967 (97%), Gaps = 4/967 (0%)
Strand = Plus / Minus
Query: 18 attgtttccattattaaagaaatatacatatacatatatataanrtgawaagttctarct 77
||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||
Sbjct: 4389 attgtttccattattaaaggaatatacatatacatatatataaaatgaaaagttctagct 4330
Query: 78 aacagagttgctgtttcctgtggtcctctctctctataaatcattctcatcatcaccaaa 137
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4329 aacgg--ttgctgtttcctgtggtcctctctctctataaatcattctcatcatcaccaaa 4272
Query: 138 gaacttgaacatgagtttcctctttttctcgtttagtttactaaaccgtggttgattcgg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4271 gaacttgaacatgagtttcctctttttctcgtttagtttactaaaccgtggttgattcgg 4212
Query: 198 aggatccatgtcaccgtacgtagtgttttgatattcttcatggaaccttaatccattacg 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4211 aggatccatgtcaccgtacgtagtgttttgatattcttcatggaaccttaatccattacg 4152
Query: 258 aatttgatttgcmacttcagtttcaaacagcctcatagtattgcttgccgaacgtttggt 317
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4151 aatttgatttgcaacttcagtttcaaacagcctcatagtattgcttgccgaacgtttggt 4092
Query: 318 tgaccaatggrgatatgcttttttccatttttggattttcaaccagagtttatatctata 377
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4091 tgaccaatggagatatgcttttttccatttttggattttcaaccagagtttatatctata 4032
Query: 378 tccgttgtcgggcatggtagttaaatattctatccacccaacaggttttggttgavagtr 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4031 tccgttgtcgggcatggtagttaaatattctatccacccaacaggttttggttgaaagta 3972
Query: 438 aaccgatccatcatatcgcatagtgtcgcattctattatagctctttgagtagcattttc 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3971 aaccgatccatcatatcgcatagtgtcgcattctattatagctctttgagtagcattttc 3912
Query: 498 ttcagttaggatcaattcctggttttggttagtttccacctcttgtgcctctctagtcga 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3911 ttcagttaggatcaattcctggttttggttagtttccacctcttgtgcctctctagtcga 3852
Query: 558 caaagatgttgatacacgttctactattgtrccgggattggcaacaattgaggacgggtc 617
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3851 caaagatgttgatacacgttctactattgtaccgggattggcaacaattgaggacgggtc 3792
Query: 618 catggatggtttagatattgcrtctacratcagagtgacgttcagtgatttcacagagct 677
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3791 catggatggtttagatattgcatctacaatcagagtgacgttcagtgatttcacagagct 3732
Query: 678 ttcgaactcagattctgttagcaaaasagatatggstctttgtvaactatacaaatctct 737
|||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||
Sbjct: 3731 ttcgaactcagattctgttagcaaaaaagatatggatctttgtaaactatacaaatctct 3672
Query: 738 ttgaaacaatcctgacattcttgtctctaagctattagcaaatctggtcaatatatcagt 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3671 ttgaaacaatcctgacattcttgtctctaagctattagcaaatctggtcaatatatcagt 3612
Query: 798 atattcccgagttgctaaagtgttcatgttaacaccacgggtagaaaataacatgtcgtt 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3611 atattcccgagttgctaaagtgttcatgttaacaccacgggtagaaaataacatgtcgtt 3552
Query: 858 gaattcatttatgaacaatttggcaagattgtacttgtccttgatattcattaacgcatc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3551 gaattcatttatgaacaatttggcaagattgtacttgtccttgatattcattaacgcatc 3492
Query: 918 ctcatcgttgcacttatcagcatctttattaaattgtgtct-catctttgttatt-attc 975
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 3491 ctcatcgttgcacttatcagcatctttattaaattgtgtctccatctttgttattaattc 3432
Query: 976 gatgcac 982
|||||||
Sbjct: 3431 gatgcac 3425
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8227
Number of Sequences: 1807
Number of extensions: 8227
Number of successful extensions: 109
Number of sequences better than 1.0e-20: 1
length of query: 1011
length of database: 10,358,551
effective HSP length: 16
effective length of query: 995
effective length of database: 10,329,639
effective search space: 10277990805
effective search space used: 10277990805
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)